STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET98337.1Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (342 aa)    
Predicted Functional Partners:
SET98322.1
Iron complex transport system ATP-binding protein.
 
 0.998
SET98398.1
Iron complex transport system substrate-binding protein.
 
 0.997
SET78131.1
Iron complex transport system ATP-binding protein.
 
 0.992
SET78020.1
Iron complex transport system substrate-binding protein.
 
 0.988
SEU06197.1
Iron complex transport system ATP-binding protein.
 
 0.987
SEU06171.1
Iron complex transport system substrate-binding protein.
  
 0.974
SEU03671.1
Putative iron-only hydrogenase system regulator.
  
 0.943
SEU06157.1
Hypothetical protein.
  
 0.936
SET98384.1
ABC-type lipoprotein export system, ATPase component.
 
  
 0.862
SET29720.1
Iron complex transport system ATP-binding protein.
 
 
 0.855
Your Current Organism:
Clostridium lavalense
NCBI taxonomy Id: 460384
Other names: CCUG 54291, Clostridium lavalense Domingo et al. 2009, JCM 14986, NML 03-A-015, [. lavalense, [Clostridium] lavalense, strain CCRI-9842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.