STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEU08820.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (448 aa)    
Predicted Functional Partners:
SEU08806.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.959
SEU08793.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.948
SET45590.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.893
SEU10794.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.885
SEU04446.1
Multiple sugar transport system permease protein.
 0.884
SET45616.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.881
SEU09623.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.880
SEU09615.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.878
SEU10801.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.874
SEU17900.1
Sn-glycerol 3-phosphate transport system permease protein.
 
 0.871
Your Current Organism:
Clostridium lavalense
NCBI taxonomy Id: 460384
Other names: CCUG 54291, Clostridium lavalense Domingo et al. 2009, JCM 14986, NML 03-A-015, [. lavalense, [Clostridium] lavalense, strain CCRI-9842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.