node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
era | rpsB | SAMN05216313_11519 | SAMN05216313_101222 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
era | rpsI | SAMN05216313_11519 | SAMN05216313_118101 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
era | rpsJ | SAMN05216313_11519 | SAMN05216313_11855 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
era | rpsL | SAMN05216313_11519 | SAMN05216313_1753 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
era | rpsP | SAMN05216313_11519 | SAMN05216313_101371 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |
era | rpsQ | SAMN05216313_11519 | SAMN05216313_11865 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.425 |
era | rpsZ | SAMN05216313_11519 | SAMN05216313_11869 | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.999 |
rplD | rpsB | SAMN05216313_11857 | SAMN05216313_101222 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
rplD | rpsC | SAMN05216313_11857 | SAMN05216313_11862 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rplD | rpsI | SAMN05216313_11857 | SAMN05216313_118101 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.994 |
rplD | rpsJ | SAMN05216313_11857 | SAMN05216313_11855 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.999 |
rplD | rpsL | SAMN05216313_11857 | SAMN05216313_1753 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
rplD | rpsP | SAMN05216313_11857 | SAMN05216313_101371 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family. | 0.990 |
rplD | rpsQ | SAMN05216313_11857 | SAMN05216313_11865 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.999 |
rplD | rpsS | SAMN05216313_11857 | SAMN05216313_11860 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Small subunit ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.999 |
rplD | rpsZ | SAMN05216313_11857 | SAMN05216313_11869 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.999 |
rpsB | era | SAMN05216313_101222 | SAMN05216313_11519 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.999 |
rpsB | rplD | SAMN05216313_101222 | SAMN05216313_11857 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.999 |
rpsB | rpsC | SAMN05216313_101222 | SAMN05216313_11862 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
rpsB | rpsI | SAMN05216313_101222 | SAMN05216313_118101 | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.999 |