STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_03834Phytoene synthase, chloroplastic. (421 aa)    
Predicted Functional Partners:
ACMD2_15045
Delta(7)-sterol-C5(6)-desaturase; Belongs to the sterol desaturase family.
  
 0.983
ACMD2_25463
Delta(7)-sterol-C5(6)-desaturase; Belongs to the sterol desaturase family.
  
 0.983
ACMD2_16023
Squalene monooxygenase.
   
 
 0.965
ACMD2_02128
Phytoene dehydrogenase, chloroplastic/chromoplastic.
  
 
 0.965
ACMD2_04197
Isopentenyl-diphosphate Delta-isomerase II.
  
 
 0.953
ACMD2_00104
Geranylgeranyl diphosphate reductase, chloroplastic.
 
 
 0.951
ACMD2_22688
Prolycopene isomerase 1, chloroplastic.
  
 
 0.946
ACMD2_15414
Farnesyl pyrophosphate synthase 1; Belongs to the FPP/GGPP synthase family.
  
 0.945
ACMD2_03635
Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic; Belongs to the FPP/GGPP synthase family.
  
 0.941
ACMD2_27309
Geranylgeranyl diphosphate reductase, chloroplastic.
 
 
 0.940
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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