STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_03824C2 NT-type domain-containing protein. (877 aa)    
Predicted Functional Partners:
ACMD2_05884
Uncharacterized protein.
  
   
 0.616
ACMD2_25144
IRK-interacting protein.
  
     0.523
ACMD2_10946
Protein UPSTREAM OF FLC.
  
     0.516
ACMD2_02442
Uncharacterized protein.
  
     0.516
ACMD2_02436
Uncharacterized protein.
  
     0.516
ACMD2_22394
Uncharacterized protein.
  
     0.512
ACMD2_26509
Uncharacterized protein.
  
     0.510
ACMD2_25495
F-box/kelch-repeat protein.
  
     0.508
ACMD2_25879
Hydroxyphenylpyruvate reductase.
  
    0.508
ACMD2_25535
Protein YABBY 4.
  
     0.507
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.