STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_21607Elongation factor P. (178 aa)    
Predicted Functional Partners:
ACMD2_00733
60S ribosomal protein L5.
   
 
 0.983
ACMD2_02601
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.972
ACMD2_17145
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.967
ACMD2_05586
50S ribosomal protein L25.
  
 
 0.958
ACMD2_01058
Deoxyhypusine synthase.
   
 0.957
ACMD2_04822
Uncharacterized protein.
  
 
 0.940
ACMD2_00410
60S ribosomal protein L21-1.
  
   0.937
ACMD2_01498
60S ribosomal protein L21-2.
  
   0.937
ACMD2_09939
60S ribosomal protein L23A.
   
 
 0.936
ACMD2_02557
60S ribosomal protein L23A; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.936
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.