STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_25679Uncharacterized protein. (149 aa)    
Predicted Functional Partners:
ACMD2_06680
Heterogeneous nuclear ribonucleoprotein F.
   
 0.794
ACMD2_11168
Serine/arginine-rich splicing factor SC35.
   
 0.777
ACMD2_01126
E3 ubiquitin-protein ligase RKP.
   
 0.730
ACMD2_11262
Nuclear cap-binding protein subunit 1.
   
 0.713
ACMD2_08001
Uncharacterized protein.
    
 0.712
ACMD2_06111
FHA domain-containing protein.
    
 0.712
ACMD2_20062
RNA-binding protein 5-A.
    
 0.712
ACMD2_16440
NADH dehydrogenase (Ubiquinone) iron-sulfur protein 5-B.
   
 0.707
ACMD2_21355
Serine/arginine-rich splicing factor SR30.
   
 0.707
ACMD2_04754
Serine/arginine-rich-splicing factor SR34.
   
 0.707
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.