STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_00541F-box protein SKIP19. (139 aa)    
Predicted Functional Partners:
ACMD2_24810
Uncharacterized protein.
  
 
  0.527
ACMD2_10761
Uncharacterized protein.
  
     0.524
ACMD2_08884
RING-box protein 1a.
    
 0.518
ACMD2_14115
RING-box protein 1.
    
 0.518
ACMD2_02140
Putative LRR receptor-like serine/threonine-protein kinase MEE39.
  
 
 
 0.515
ACMD2_26375
UPF0481 protein.
  
     0.511
ACMD2_01347
SKP1-like protein 1A.
  
 0.506
ACMD2_13575
21 kDa protein.
  
     0.504
ACMD2_24352
Scarecrow-like protein 28; Belongs to the GRAS family.
  
     0.499
ACMD2_17696
Uncharacterized protein.
  
     0.496
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.