STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_00541F-box protein SKIP19. (139 aa)    
Predicted Functional Partners:
ACMD2_02140
Putative LRR receptor-like serine/threonine-protein kinase MEE39.
  
 
 
 0.706
ACMD2_17046
Bifunctional dihydrofolate reductase-thymidylate synthase.
     
  0.655
ACMD2_18844
Putative bifunctional dihydrofolate reductase-thymidylate synthase.
     
  0.655
ACMD2_18843
Putative bifunctional dihydrofolate reductase-thymidylate synthase.
     
  0.655
ACMD2_08369
Bifunctional dihydrofolate reductase-thymidylate synthase.
     
  0.655
ACMD2_22568
Uncharacterized protein.
  
   
 0.580
ACMD2_22300
SKP1-interacting partner 15.
  
   
 0.570
ACMD2_04038
E3 ubiquitin-protein ligase MBR2.
      
 0.533
ACMD2_23282
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 
 0.533
ACMD2_01971
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
      
 0.532
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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