Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_15659Putative E3 ubiquitin-protein ligase RF298. (834 aa)    
Predicted Functional Partners:
ACMD2_07358
Serine/threonine-protein kinase Aurora-1; Belongs to the protein kinase superfamily.
   
 0.906
ACMD2_07359
Serine/threonine-protein kinase Aurora-1; Belongs to the protein kinase superfamily.
   
 0.906
ACMD2_05597
Serine/threonine-protein kinase Aurora-3.
   
 0.906
ACMD2_02470
Ubiquitin-40S ribosomal protein S27a-3.
    
 0.835
ACMD2_01889
annotation not available
   
 0.820
ACMD2_00020
Chromatin structure-remodeling complex protein SYD.
    
 
 0.816
ACMD2_00805
Mitotic spindle checkpoint protein MAD2.
   
 
 0.814
ACMD2_09764
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.810
ACMD2_15273
ATP synthase subunit beta, chloroplastic.
   
 0.810
ACMD2_14105
ATP synthase subunit beta, chloroplastic.
   
 0.810
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.