STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_15447Sphingoid long-chain bases kinase 1. (810 aa)    
Predicted Functional Partners:
ACMD2_10962
Lipid phosphate phosphatase delta.
   
 0.812
ACMD2_11537
Sphingolipid delta(4)-desaturase DES1-like; Sphingolipid-delta-4-desaturase required for the biosynthesis of delta-4-unsaturated sphingolipids and derivatives.
    
 0.797
ACMD2_12706
3-dehydrosphinganine reductase TSC10A.
     
 0.769
ACMD2_00892
EamA domain-containing protein.
    
 0.728
ACMD2_09151
Putative acyl-activating enzyme 19.
  
  
 0.728
ACMD2_07014
Somatic embryogenesis receptor kinase 1.
   
 
  0.665
ACMD2_04635
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
    
  0.641
ACMD2_22352
T-complex protein 1 subunit gamma; Belongs to the TCP-1 chaperonin family.
    
  0.641
ACMD2_02456
T-complex protein 1 subunit beta.
    
  0.639
ACMD2_12954
Alkaline ceramidase 3.
    
 0.631
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.