STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_17394Methyltransferase. (616 aa)    
Predicted Functional Partners:
ACMD2_16890
Oligouridylate-binding protein 1B.
  
     0.543
ACMD2_06495
MACPF domain-containing protein CAD1.
  
     0.542
ACMD2_17240
Protein SHI RELATED SEQUENCE 2.
  
     0.542
ACMD2_23989
BTB/POZ domain-containing protein POB1.
  
     0.541
ACMD2_24553
Protein trichome birefringence-like 38.
  
     0.541
ACMD2_13935
Growth-regulating factor 10.
  
     0.541
ACMD2_06926
Protein SHI RELATED SEQUENCE 5.
  
     0.540
ACMD2_24080
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.539
ACMD2_23099
OBERON-like protein.
  
     0.539
ACMD2_05575
LOB domain-containing protein 38.
  
     0.537
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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