Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACMD2_06951PPM-type phosphatase domain-containing protein. (284 aa)    
Predicted Functional Partners:
ACMD2_19329
Serine/threonine-protein phosphatase 5.
    
 
 0.625
ACMD2_02800
Ethylene-insensitive protein 2.
      
 0.624
ACMD2_09433
Ankyrin-3.
    
   0.584
ACMD2_15532
Peptidyl-prolyl cis-trans isomerase CYP57.
   
 
 0.563
ACMD2_00620
Calcium homeostasis endoplasmic reticulum protein.
    
 
 0.546
ACMD2_04800
TPR repeat-containing thioredoxin TTL1.
   
   0.521
ACMD2_21927
TPR repeat-containing thioredoxin TTL1.
   
   0.521
ACMD2_01546
TPR repeat-containing thioredoxin TTL1.
   
   0.521
ACMD2_12785
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
    
 
 0.503
ACMD2_12003
Abscisic acid receptor PYL5.
    
 0.495
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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