Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_17396Protein IQ-DOMAIN 31. (471 aa)    
Predicted Functional Partners:
ACMD2_09402
Glycine-rich protein A3.
      
 0.527
ACMD2_10632
Uncharacterized protein.
  
     0.511
ACMD2_13964
Transcription factor bHLH157.
  
     0.499
ACMD2_22014
Uncharacterized protein.
  
     0.494
ACMD2_02617
RING-type domain-containing protein.
  
     0.493
ACMD2_07163
Transcription factor LHW.
  
     0.492
ACMD2_17171
Uncharacterized protein.
  
     0.491
ACMD2_11098
Uncharacterized protein.
  
     0.485
ACMD2_11142
Protein FAF-like, chloroplastic.
  
     0.481
ACMD2_22864
Uncharacterized protein.
  
     0.474
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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