STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_08816SPX domain-containing protein 4. (209 aa)    
Predicted Functional Partners:
ACMD2_01969
Protein PHR1-LIKE 1.
    
 0.550
ACMD2_00400
Protein PHR1-LIKE 1.
    
 0.521
ACMD2_06165
Peptidyl-prolyl cis-trans isomerase E.
      
 0.503
ACMD2_07458
Phosphate transporter PHO1-2.
      
 0.478
ACMD2_04261
Cyclin-dependent kinase B2-1; Belongs to the protein kinase superfamily.
    
 0.464
ACMD2_14324
Cell division control protein A; Belongs to the protein kinase superfamily.
    
 0.464
ACMD2_15380
Cyclin-dependent kinase B1-1; Belongs to the protein kinase superfamily.
    
 0.464
ACMD2_09259
Serine/threonine-protein kinase STN8, chloroplastic.
    
 0.464
ACMD2_11661
Uncharacterized protein.
    
 0.464
ACMD2_25123
Serine/threonine-protein kinase STN7, chloroplastic.
    
 0.464
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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