Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACMD2_08816SPX domain-containing protein 4. (209 aa)    
Predicted Functional Partners:
ACMD2_08493
E3 ubiquitin protein ligase.
    
   0.793
ACMD2_08017
Coiled-coil domain-containing protein 115.
    
   0.793
ACMD2_09366
Transcription factor UNE12.
    
 
 0.754
ACMD2_05605
E3 ubiquitin protein ligase.
    
   0.686
ACMD2_07458
Phosphate transporter PHO1-2.
    
 
 0.669
ACMD2_06165
Peptidyl-prolyl cis-trans isomerase E.
      
 0.646
ACMD2_22157
Putative ubiquitin-conjugating enzyme E2 24.
      
 0.641
ACMD2_09100
Leucine-rich repeat receptor protein kinase MSP1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.641
ACMD2_15361
Two-component response regulator ORR24.
    
 
 0.631
ACMD2_00500
Organic cation/carnitine transporter 4.
      
 0.629
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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