STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_22249Pentatricopeptide repeat-containing protein, mitochondrial. (543 aa)    
Predicted Functional Partners:
ACMD2_12157
Uncharacterized protein.
  
 
   0.510
ACMD2_13784
Uncharacterized protein.
  
     0.500
ACMD2_15712
PAN domain-containing protein.
  
     0.483
ACMD2_07700
Putative pentatricopeptide repeat-containing protein.
  
     0.480
ACMD2_15439
UPF0496 protein 4.
  
     0.478
ACMD2_21560
Conserved oligomeric Golgi complex subunit 4.
  
     0.478
ACMD2_10106
Uncharacterized protein.
  
     0.477
ACMD2_02377
Protein YLS9.
  
     0.476
ACMD2_22313
Putative CRM domain-containing protein, chloroplastic.
    
 
 0.474
ACMD2_07016
Uncharacterized protein.
  
     0.472
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.