Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_18944Uncharacterized protein. (124 aa)    
Predicted Functional Partners:
ACMD2_01126
E3 ubiquitin-protein ligase RKP.
   
 0.785
ACMD2_25679
Uncharacterized protein.
   
 0.637
ACMD2_03268
Polypyrimidine tract-binding protein.
   
 0.637
ACMD2_01561
Polypyrimidine tract-binding protein.
   
 0.637
ACMD2_06680
Heterogeneous nuclear ribonucleoprotein F.
   
 0.634
ACMD2_11740
Regulator of nonsense transcripts.
    
 
 0.623
ACMD2_06142
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
      
 0.570
ACMD2_11262
Nuclear cap-binding protein subunit 1.
    
  0.568
ACMD2_14194
Uncharacterized protein.
      
 0.563
ACMD2_18947
ADP-ribosylation factor-like protein 8A; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.535
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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