STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_14355Xyloglucan galactosyltransferase KATAMARI; Belongs to the glycosyltransferase 47 family. (571 aa)    
Predicted Functional Partners:
ACMD2_06363
Glycosyltransferase family protein 64 protein C5.
    
 0.534
ACMD2_15310
Glycosyltransferase family 64 protein C4.
    
 0.534
ACMD2_04503
Glycosyltransferase family protein 64 protein C5.
    
 0.534
ACMD2_07904
Xyloglucan glycosyltransferase 4.
    
 
 0.515
ACMD2_26984
Putative glycosyltransferase 2.
  
 
 
 0.465
ACMD2_19658
Protein NRT1/ PTR FAMILY 6.1.
      
 0.420
ACMD2_08598
Putative beta-1,4-xylosyltransferase IRX10L; Belongs to the glycosyltransferase 47 family.
  
   
 0.413
ACMD2_12250
Putative beta-1,4-xylosyltransferase IRX10; Belongs to the glycosyltransferase 47 family.
  
   
 0.411
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.