Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACMD2_16482Protein CCA1. (700 aa)    
Predicted Functional Partners:
ACMD2_21665
Protein LHY.
     
  0.815
ACMD2_15031
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue; Belongs to the peroxidase family.
    
 0.713
ACMD2_11850
Histone acetyltransferase MCC1.
    
 0.684
ACMD2_13600
Transcriptional adapter.
    
 0.682
ACMD2_02470
Ubiquitin-40S ribosomal protein S27a-3.
   
 0.619
ACMD2_00733
60S ribosomal protein L5.
   
   0.583
ACMD2_05338
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
   0.582
ACMD2_22906
Heat shock 70 kDa protein 17.
   
 0.556
ACMD2_19573
Heat shock 70 kDa protein 17.
   
 0.556
ACMD2_07476
60S ribosomal protein L32-1.
   
   0.519
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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