STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_16482Protein CCA1. (700 aa)    
Predicted Functional Partners:
ACMD2_21665
Protein LHY.
  
  
 
0.800
ACMD2_15031
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue; Belongs to the peroxidase family.
    
 0.647
ACMD2_02470
Ubiquitin-40S ribosomal protein S27a-3.
   
 0.639
ACMD2_12437
Cullin-associated NEDD8-dissociated protein 1.
   
  0.594
ACMD2_05210
Protein RBL.
    
  0.593
ACMD2_22045
Uncharacterized protein.
   
 
  0.592
ACMD2_13152
BTB/POZ domain-containing protein.
   
 
  0.579
ACMD2_02568
COP9 signalosome complex subunit 2.
   
 
  0.577
ACMD2_13542
Plant UBX domain-containing protein 7.
   
 
  0.573
ACMD2_15339
NEDD8-activating enzyme E1 regulatory subunit.
   
 
 0.489
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.