STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_15931S-acyltransferase; Belongs to the DHHC palmitoyltransferase family. (500 aa)    
Predicted Functional Partners:
ACMD2_25946
AP-3 complex subunit delta.
    
 
 0.655
ACMD2_02313
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
      
 0.641
ACMD2_15679
Uncharacterized protein.
      
 0.573
ACMD2_02677
Ras-related protein Rab11D.
    
 0.456
ACMD2_16970
Ras-related protein Rab11D.
    
 0.456
ACMD2_25419
Uncharacterized protein.
  
     0.408
ACMD2_24758
Protein translocase subunit SecA 1.
  
     0.402
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.