Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACMD2_16493Expansin-A7. (158 aa)    
Predicted Functional Partners:
ACMD2_17535
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
  
 
 0.727
ACMD2_09433
Ankyrin-3.
   
  0.699
ACMD2_06298
4-hydroxy-4-methyl-2-oxoglutarate aldolase; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
    
 
 0.661
ACMD2_13780
Non-classical arabinogalactan protein 31.
  
  
 0.632
ACMD2_22100
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
   
 0.630
ACMD2_08991
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
   
 0.630
ACMD2_03603
Uncharacterized protein.
  
    0.617
ACMD2_17558
Uncharacterized protein.
  
  
 0.602
ACMD2_26027
Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3.
    
 
 0.576
ACMD2_19219
4-hydroxy-4-methyl-2-oxoglutarate aldolase; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
    
 
 0.576
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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