Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACMD2_12952Peroxisome biogenesis protein 1. (1107 aa)    
Predicted Functional Partners:
ACMD2_00691
Peroxisome biogenesis protein 6.
  
0.998
ACMD2_14113
Peroxisomal membrane protein PEX14.
    
 0.985
ACMD2_02895
Peroxisome biogenesis protein 5.
   
 0.984
ACMD2_01970
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.982
ACMD2_07386
Peroxisome biogenesis factor 10.
    
 0.978
ACMD2_19626
Peroxisome biogenesis protein 7.
     
 0.853
ACMD2_20468
Peroxisome biogenesis protein 3-2.
   
 0.806
ACMD2_18057
Peroxisomal membrane protein PEX16.
     
 0.739
ACMD2_02470
Ubiquitin-40S ribosomal protein S27a-3.
    
 0.736
ACMD2_06715
NPL4-like protein.
    
 0.698
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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