Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_01965Zinc finger protein CONSTANS-LIKE 4. (402 aa)    
Predicted Functional Partners:
ACMD2_12116
DUF1421 domain-containing protein.
  
   
 0.704
ACMD2_11921
Sperm-associated antigen 1A.
    
 
 0.670
ACMD2_16914
Transcription factor PCF5.
    
 
 0.664
ACMD2_20343
Uncharacterized protein.
    
 
 0.657
ACMD2_23498
Transcription factor bHLH63.
      
 0.656
ACMD2_08526
Uncharacterized protein.
    
 
 0.655
ACMD2_22066
Uncharacterized protein.
    
 
 0.652
ACMD2_00736
Protein FAM136A.
      
 0.641
ACMD2_14451
Uncharacterized protein.
      
 0.641
ACMD2_03131
Protein OBERON 2.
      
 0.641
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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