Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ACMD2_27203DUF632 domain-containing protein. (175 aa)    
Predicted Functional Partners:
ACMD2_09433
Ankyrin-3.
   
  0.699
ACMD2_22100
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
   
 0.630
ACMD2_08991
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
   
 0.630
ACMD2_08555
Non-specific lipid transfer protein GPI-anchored 2; Belongs to the plant LTP family.
  
 
  0.560
ACMD2_10399
Uncharacterized protein.
  
 
  0.559
ACMD2_03129
Non-specific lipid-transfer protein-like protein; Belongs to the plant LTP family.
  
 
  0.545
ACMD2_10096
Uncharacterized protein.
 
     0.539
ACMD2_25319
Zinc finger protein ZAT10.
  
 
  0.537
ACMD2_08563
Non-specific lipid transfer protein GPI-anchored 2; Belongs to the plant LTP family.
  
 
  0.535
ACMD2_00006
Putative oxidoreductase YgbJ.
    
  0.523
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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