Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACMD2_01979F-box/FBD/LRR-repeat protein. (437 aa)    
Predicted Functional Partners:
ACMD2_13574
Putative cyclic nucleotide-gated ion channel 17.
     
  0.738
ACMD2_15006
Putative cyclic nucleotide-gated ion channel 19.
     
  0.632
ACMD2_23652
Putative cyclic nucleotide-gated ion channel 20, chloroplastic.
     
  0.632
ACMD2_24518
Mitogen-activated protein kinase kinase kinase 1; Belongs to the protein kinase superfamily.
    
  0.613
ACMD2_15756
Mitogen-activated protein kinase kinase kinase 1.
    
  0.613
ACMD2_17804
Mitogen-activated protein kinase kinase kinase 1.
    
  0.613
ACMD2_26352
Mitogen-activated protein kinase kinase kinase 1.
    
  0.613
ACMD2_01962
Putative cyclic nucleotide-gated ion channel 6.
     
  0.586
ACMD2_07705
Cyclic nucleotide-gated ion channel 4.
     
  0.558
ACMD2_07707
Cyclic nucleotide-gated ion channel 4.
     
  0.558
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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