Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACMD2_04393Nuclear pore complex protein NUP43. (366 aa)    
Predicted Functional Partners:
ACMD2_20058
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.937
ACMD2_01563
Protein SEH1; Belongs to the WD repeat SEC13 family.
    
 0.932
ACMD2_03710
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.931
ACMD2_18695
Nuclear pore complex protein NUP133.
    
 0.901
ACMD2_20564
Nuclear pore complex protein NUP133.
    
 0.901
ACMD2_22001
Protein transport protein SEC B; Belongs to the WD repeat SEC13 family.
    
 0.882
ACMD2_05200
Nuclear pore complex protein NUP160.
    
 
 0.856
ACMD2_11725
Nuclear pore complex protein NUP62.
    
 
 0.837
ACMD2_11596
Nuclear pore complex protein NUP88.
    
 
 0.826
ACMD2_20629
Aladin.
    
 
 0.805
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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