STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_04393Nuclear pore complex protein NUP43. (366 aa)    
Predicted Functional Partners:
ACMD2_04970
Uncharacterized protein.
  
     0.500
ACMD2_19744
Uncharacterized protein.
  
     0.499
ACMD2_05378
Uncharacterized protein.
  
     0.495
ACMD2_09567
Armadillo repeat-containing protein LFR.
  
     0.484
ACMD2_17038
Uncharacterized protein.
  
     0.483
ACMD2_06979
Uncharacterized protein.
  
     0.482
ACMD2_19681
PsbP domain-containing protein.
  
     0.480
ACMD2_20420
Armadillo repeat-containing protein LFR.
  
     0.478
ACMD2_03568
Growth hormone-regulated TBC protein 1.
  
     0.477
ACMD2_10399
Uncharacterized protein.
  
     0.466
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.