STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_04396Ubiquitin receptor RAD23b. (374 aa)    
Predicted Functional Partners:
ACMD2_07936
Uncharacterized protein.
   
 0.982
ACMD2_21729
Uncharacterized protein.
   
 0.982
ACMD2_05863
DNA repair protein RAD4.
   
 0.979
ACMD2_10272
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 0.967
ACMD2_23216
Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase.
    
 0.965
ACMD2_17485
Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase.
    
 0.965
ACMD2_13071
E3 ubiquitin-protein ligase UPL4.
    
 0.962
ACMD2_09339
E3 ubiquitin-protein ligase UPL4.
    
 0.962
ACMD2_23709
26S proteasome non-ATPase regulatory subunit.
   
 0.960
ACMD2_05969
26S proteasome non-ATPase regulatory subunit.
   
 0.960
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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