STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_16488SUMO-conjugating enzyme SCE1; Belongs to the ubiquitin-conjugating enzyme family. (132 aa)    
Predicted Functional Partners:
ACMD2_20617
SUMO-activating enzyme subunit 1B-2.
  
 0.978
ACMD2_19874
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
   
 0.974
ACMD2_19844
RAN GTPase-activating protein 1.
   
 0.951
ACMD2_11369
RAN GTPase-activating protein 1.
   
 0.951
ACMD2_05981
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.935
ACMD2_13673
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.935
ACMD2_16343
Transportin-3.
   
 
 0.911
ACMD2_08972
SP-RING-type domain-containing protein.
    
 0.905
ACMD2_26884
Small ubiquitin-related modifier.
   
 0.900
ACMD2_09917
Small ubiquitin-related modifier.
   
 0.900
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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