Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_04379Chaperone protein dnaJ 8, chloroplastic. (156 aa)    
Predicted Functional Partners:
ACMD2_03195
Chaperone protein dnaJ 11, chloroplastic.
   
 0.852
ACMD2_15801
Chaperone protein dnaJ 20, chloroplastic.
   
 0.809
ACMD2_23000
Chaperone protein dnaJ 20, chloroplastic.
   
 0.809
ACMD2_21758
Chaperone protein dnaJ 20, chloroplastic.
   
 0.809
ACMD2_24252
Chaperone protein dnaJ 11, chloroplastic.
   
 0.794
ACMD2_10250
Chaperone protein dnaJ 11, chloroplastic.
   
 0.794
ACMD2_22906
Heat shock 70 kDa protein 17.
  
 0.717
ACMD2_19573
Heat shock 70 kDa protein 17.
  
 0.717
ACMD2_04259
Heat shock 70 kDa protein, mitochondrial; Belongs to the heat shock protein 70 family.
  
 0.689
ACMD2_23842
Stromal 70 kDa heat shock-related protein, chloroplastic; Belongs to the heat shock protein 70 family.
  
 0.689
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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