Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_1648450S ribosomal protein L11, chloroplastic; Belongs to the universal ribosomal protein uL11 family. (226 aa)    
Predicted Functional Partners:
ACMD2_09278
50S ribosomal protein L17, chloroplastic; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.990
ACMD2_19955
50S ribosomal protein L24, chloroplastic; Belongs to the universal ribosomal protein uL24 family.
  
 0.989
ACMD2_09914
50S ribosomal protein L28, chloroplastic.
   
 
 0.988
ACMD2_19229
30S ribosomal protein S10, chloroplastic.
  
 
 0.988
ACMD2_07409
50S ribosomal protein L21, chloroplastic.
  
 
 0.988
ACMD2_21161
50S ribosomal protein L29, chloroplastic.
  
 0.987
ACMD2_15267
30S ribosomal protein S3, chloroplastic.
  
 0.987
ACMD2_02062
50S ribosomal protein L1.
  
 0.987
ACMD2_07645
50S ribosomal protein L22, chloroplastic; Belongs to the universal ribosomal protein uL22 family.
 
 0.986
ACMD2_16003
30S ribosomal protein S14, chloroplastic.
  
 
 0.985
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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