Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACMD2_23599Uncharacterized protein. (213 aa)    
Predicted Functional Partners:
ACMD2_03417
Alkyl transferase; Belongs to the UPP synthase family.
   
 0.986
ACMD2_13155
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
   
 0.971
ACMD2_16638
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
     
 0.916
ACMD2_14965
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
     
 0.914
ACMD2_26422
Geranylgeranyl pyrophosphate synthase, chloroplastic; Belongs to the FPP/GGPP synthase family.
  
 
 0.900
ACMD2_03635
Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic; Belongs to the FPP/GGPP synthase family.
  
 
 0.900
ACMD2_03834
Phytoene synthase, chloroplastic.
     
 0.896
ACMD2_10956
Squalene synthase.
     
 0.896
ACMD2_04704
Phytoene synthase, chloroplastic.
     
 0.896
ACMD2_19968
(3S,6E)-nerolidol synthase 1.
     
  0.882
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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