Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACMD2_04359Copper transporter 6. (154 aa)    
Predicted Functional Partners:
ACMD2_19441
Squamosa promoter-binding-like protein 9.
      
 0.625
ACMD2_26141
Squamosa promoter-binding-like protein 9.
      
 0.625
ACMD2_12257
Copper-transporting ATPase RAN1.
    
 
 0.590
ACMD2_09789
Putative copper-transporting ATPase HMA5.
    
 
 0.588
ACMD2_00979
Cytochrome c oxidase copper chaperone 1.
   
  
 0.543
ACMD2_22986
Photosystem II 10 kDa polypeptide, chloroplastic.
   
   0.527
ACMD2_08690
Putative metal-nicotianamine transporter YSL9.
   
  
 0.523
ACMD2_23709
26S proteasome non-ATPase regulatory subunit.
      
 0.520
ACMD2_05969
26S proteasome non-ATPase regulatory subunit.
      
 0.520
ACMD2_03172
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
      
 0.518
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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