Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_12947WD repeat-containing protein 26. (571 aa)    
Predicted Functional Partners:
ACMD2_08571
Protein RMD A.
   
 0.961
ACMD2_06533
Armadillo repeat-containing protein 8.
   
 0.955
ACMD2_15679
Uncharacterized protein.
    
 0.926
ACMD2_13458
Macrophage erythroblast attacher.
   
 0.921
ACMD2_02147
Uncharacterized protein.
   
 0.854
ACMD2_11647
Glucose-induced degradation protein.
   
 0.854
ACMD2_18962
Glucose-induced degradation protein.
   
 0.854
ACMD2_09305
Glucose-induced degradation protein.
   
 0.854
ACMD2_22394
Uncharacterized protein.
   
 0.854
ACMD2_13071
E3 ubiquitin-protein ligase UPL4.
   
  
 0.809
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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