Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ACMD2_01925Mediator of RNA polymerase II transcription subunit 15a. (1213 aa)    
Predicted Functional Partners:
ACMD2_04555
Mediator of RNA polymerase II transcription subunit 27.
    
   0.786
ACMD2_13424
Mediator of RNA polymerase II transcription subunit 6.
    
   0.786
ACMD2_07223
Mediator of RNA polymerase II transcription subunit 8.
    
   0.735
ACMD2_07233
Mediator of RNA polymerase II transcription subunit 8.
    
   0.735
ACMD2_03738
WD repeat-containing protein 48.
    
 
 0.535
ACMD2_25996
Glutamate--tRNA ligase, chloroplastic/mitochondrial.
  
 
   0.530
ACMD2_00062
Ribosomal RNA small subunit methyltransferase G.
    
 
 0.527
ACMD2_17524
Protein RCC2.
     
 0.449
ACMD2_16737
ATP-dependent DNA helicase Q-like 3.
    
 
 0.433
ACMD2_00741
Uncharacterized protein.
  
     0.426
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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