Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_13708Proton pump-interactor 1. (634 aa)    
Predicted Functional Partners:
ACMD2_16440
NADH dehydrogenase (Ubiquinone) iron-sulfur protein 5-B.
      
 0.449
ACMD2_06248
Putative NAD(P)H dehydrogenase (Quinone) FQR1-like 2.
      
 0.449
ACMD2_08157
Mitochondrial import receptor subunit TOM.
      
 0.443
ACMD2_00219
Uncharacterized protein.
      
 0.443
ACMD2_04827
Rhodanese-like domain-containing protein 4, chloroplastic.
      
 0.440
ACMD2_25536
Protein YABBY 5.
  
     0.415
ACMD2_07450
SAP-like protein BP-73.
  
 
   0.407
ACMD2_26657
WEB family protein, chloroplastic.
  
     0.405
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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