Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACMD2_01980ATP-dependent RNA helicase DHX36. (978 aa)    
Predicted Functional Partners:
ACMD2_01553
Protein SDE.
    
 0.923
ACMD2_08708
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.914
ACMD2_03468
AP-2 complex subunit alpha; Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome.
   
  0.874
ACMD2_01787
Putative ATP-dependent RNA helicase YTHDC2.
     
  0.848
ACMD2_10231
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
   
 0.816
ACMD2_07035
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
   
 0.816
ACMD2_01755
Putative ATP-dependent RNA helicase rha-2.
  
 
0.804
ACMD2_16514
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.762
ACMD2_14149
KRR1 small subunit processome component.
   
 0.762
ACMD2_05967
DEAD-box ATP-dependent RNA helicase 28.
   
 0.751
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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