STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_01980ATP-dependent RNA helicase DHX36. (978 aa)    
Predicted Functional Partners:
ACMD2_08708
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.927
ACMD2_10231
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.900
ACMD2_07035
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.900
ACMD2_01553
Protein SDE.
    
 0.881
ACMD2_01787
Putative ATP-dependent RNA helicase YTHDC2.
  
  
 
0.878
ACMD2_14829
ATP-dependent RNA helicase DHX36.
  
  
 
0.852
ACMD2_03148
ATP-dependent RNA helicase DHX36.
  
  
 
0.851
ACMD2_15816
Putative U3 small nucleolar RNA-associated protein 7.
   
 0.847
ACMD2_23834
U3 small nucleolar RNA-associated protein 14.
   
 0.845
ACMD2_18505
U3 small nucleolar RNA-associated protein 14.
   
 0.845
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.