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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
ACMD2_04369Protein ROOT INITIATION DEFECTIVE 3. (470 aa)    
Predicted Functional Partners:
ACMD2_00325
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.990
ACMD2_20502
Testis-expressed sequence 10 protein.
   
 0.983
ACMD2_02957
Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
   
 0.976
ACMD2_07008
Ribosomal biogenesis protein LAS1L.
   
 0.975
ACMD2_08317
MKI67 FHA domain-interacting nucleolar phosphoprotein-like.
   
 
 0.965
ACMD2_13690
Ribosome production factor.
   
 
 0.963
ACMD2_19954
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
 
 0.959
ACMD2_09219
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 0.952
ACMD2_12490
Ribosome biogenesis protein NSA.
   
 
 0.948
ACMD2_23602
Ribosome biogenesis protein ERB1.
   
 0.940
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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