STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_07898Uncharacterized protein. (222 aa)    
Predicted Functional Partners:
ACMD2_04036
Thioredoxin-like protein CITRX, chloroplastic.
   
  
 0.715
ACMD2_11504
Fructokinase-like 2, chloroplastic.
   
  
 0.709
ACMD2_06123
Fructokinase-like 1, chloroplastic.
   
  
 0.686
ACMD2_02428
Pentatricopeptide repeat-containing protein, chloroplastic.
      
 0.628
ACMD2_21368
Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12.
   
  
 0.611
ACMD2_17853
Protein PLASTID TRANSCRIPTIONALLY ACTIVE 12.
   
  
 0.611
ACMD2_09777
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase.
      
 0.609
ACMD2_10805
Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7.
  
   
 0.607
ACMD2_27286
Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7.
  
   
 0.597
ACMD2_15788
Uncharacterized protein.
  
  
 0.590
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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