STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_04362Putative CCR4-associated factor 7. (286 aa)    
Predicted Functional Partners:
ACMD2_19167
CCR4-NOT transcription complex subunit 1.
   
 0.954
ACMD2_10591
CCR4-NOT transcription complex subunit 11.
    
 0.939
ACMD2_03397
CCR4-NOT transcription complex subunit 3.
    
 0.908
ACMD2_02850
CCR4-NOT transcription complex subunit 3.
    
 0.908
ACMD2_12226
Uncharacterized protein.
   
 0.901
ACMD2_00663
Cell differentiation protein rcd1.
   
 0.901
ACMD2_13773
Cell differentiation protein RCD.
   
 0.901
ACMD2_06426
CCR4-NOT transcription complex subunit 10.
    
 0.896
ACMD2_04455
CCR4-NOT transcription complex subunit 10.
    
 0.896
ACMD2_13077
CCR4-NOT transcription complex subunit 4.
    
 0.892
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.