STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_04362Putative CCR4-associated factor 7. (286 aa)    
Predicted Functional Partners:
ACMD2_19167
CCR4-NOT transcription complex subunit 1.
   
 0.968
ACMD2_04906
Thioredoxin-like 4, chloroplastic.
   
 0.953
ACMD2_03397
CCR4-NOT transcription complex subunit 3.
    
 0.943
ACMD2_02850
CCR4-NOT transcription complex subunit 3.
    
 0.943
ACMD2_14022
Uncharacterized protein.
    
 0.927
ACMD2_13077
CCR4-NOT transcription complex subunit 4.
    
 0.927
ACMD2_00043
General negative regulator of transcription subunit 4.
    
 0.927
ACMD2_10591
CCR4-NOT transcription complex subunit 11.
    
 0.905
ACMD2_12226
Uncharacterized protein.
   
 0.900
ACMD2_00663
Cell differentiation protein rcd1.
   
 0.900
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.