STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_18064D-amino-acid transaminase, chloroplastic. (285 aa)    
Predicted Functional Partners:
ACMD2_05064
Dihydroxy-acid dehydratase, chloroplastic.
  
 0.966
ACMD2_11105
Putative aminodeoxychorismate synthase, chloroplastic.
  
 
 0.961
ACMD2_11503
Folate synthesis bifunctional protein, mitochondrial.
  
 
 0.956
ACMD2_19255
2-isopropylmalate synthase A.
  
 0.917
ACMD2_05356
D-amino-acid transaminase, chloroplastic.
     
  0.882
ACMD2_12375
Threonine dehydratase.
  
 0.871
ACMD2_13443
Acetolactate synthase 1, chloroplastic.
  
 0.865
ACMD2_18337
Acetolactate synthase 1, chloroplastic.
  
 0.865
ACMD2_20145
Acetolactate synthase.
  
 0.865
ACMD2_04833
Dihydrofolate synthetase.
    
 0.844
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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