Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACMD2_05097Mitogen-activated protein kinase. (616 aa)    
Predicted Functional Partners:
ACMD2_22100
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
   
 0.954
ACMD2_08991
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
   
 0.954
ACMD2_03043
Protein-tyrosine-phosphatase PTP1.
    
 0.865
ACMD2_14039
Mitogen-activated protein kinase kinase 3.
    
 0.845
ACMD2_10907
Protein-tyrosine-phosphatase IBR5.
    
 0.813
ACMD2_05819
Calmodulin.
    
 0.807
ACMD2_03266
Putative calcium-binding protein.
    
 0.788
ACMD2_06642
Arsenate reductase 2.2.
    
 0.779
ACMD2_15694
NAD-specific glutamate dehydrogenase.
    
 0.778
ACMD2_07733
Guanine nucleotide-binding protein subunit beta.
   
 0.774
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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