STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_13906OBERON-like protein. (211 aa)    
Predicted Functional Partners:
ACMD2_23099
OBERON-like protein.
 
     0.682
ACMD2_03586
APO protein 1, chloroplastic.
  
     0.504
ACMD2_22764
APO protein 1, chloroplastic.
  
     0.503
ACMD2_07737
Methyltransferase.
  
     0.503
ACMD2_16451
NAC transcription factor NAM-1.
  
     0.488
ACMD2_03219
Protein SHI RELATED SEQUENCE 1.
  
     0.477
ACMD2_10848
Ninja-family protein.
  
     0.475
ACMD2_02997
NAC domain-containing protein 68.
  
     0.451
ACMD2_12739
Transcription factor bHLH130.
  
     0.447
ACMD2_04849
BTB/POZ domain-containing protein POB1.
  
     0.442
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.