Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ACMD2_06703Nicotianamine aminotransferase A. (321 aa)    
Predicted Functional Partners:
ACMD2_02758
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.991
ACMD2_01001
Aspartate aminotransferase.
   
 0.985
ACMD2_12321
Aspartate aminotransferase.
   
 0.983
ACMD2_04050
Aspartate aminotransferase.
   
 0.983
ACMD2_10910
Chorismate mutase.
    
 0.982
ACMD2_15585
Homocysteine S-methyltransferase 2.
   
 
 0.981
ACMD2_13237
Chorismate mutase.
    
 0.973
ACMD2_08684
Methionine gamma-lyase.
  
 
 0.969
ACMD2_07106
Anthranilate synthase alpha subunit 1, chloroplastic.
   
 0.966
ACMD2_08786
Protein PHYLLO, chloroplastic.
   
 0.963
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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