Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_06681Transport and Golgi organization protein. (180 aa)    
Predicted Functional Partners:
ACMD2_04346
Costars family protein.
    
   0.633
ACMD2_04820
NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 2.
      
 0.606
ACMD2_15956
E3 ubiquitin-protein ligase MIEL1.
      
 0.568
ACMD2_06017
Mitochondrial succinate-fumarate transporter 1; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.531
ACMD2_02543
Uncharacterized protein.
      
 0.528
ACMD2_12154
Putative mitochondrial import inner membrane translocase subunit TIM21.
      
 0.519
ACMD2_01915
E3 ubiquitin-protein ligase MIEL1.
      
 0.517
ACMD2_04248
Nef-associated protein 1.
      
 0.517
ACMD2_08973
Protein DGCR14.
      
 0.499
ACMD2_14587
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
   
  
 0.478
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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