STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_16876Protein argonaute 16; Belongs to the argonaute family. (931 aa)    
Predicted Functional Partners:
ACMD2_13175
DNA-directed RNA polymerase V subunit 1.
   
 0.970
ACMD2_17329
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.895
ACMD2_13652
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.836
ACMD2_00567
Endoribonuclease Dicer b; Belongs to the helicase family. Dicer subfamily.
   
 0.833
ACMD2_07120
Endoribonuclease Dicer a; Belongs to the helicase family. Dicer subfamily.
   
 0.833
ACMD2_08340
Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily.
   
 0.833
ACMD2_03610
DNA-binding protein HEXBP.
    
 0.823
ACMD2_19132
Endoribonuclease Dicer.
   
 0.794
ACMD2_19666
Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily.
   
 0.794
ACMD2_24564
Ribonuclease 3-like protein 3.
   
 0.722
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.