Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACMD2_16876Protein argonaute 16; Belongs to the argonaute family. (931 aa)    
Predicted Functional Partners:
ACMD2_13175
DNA-directed RNA polymerase V subunit 1.
    
 0.957
ACMD2_17329
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.900
ACMD2_08340
Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily.
    
 0.874
ACMD2_00567
Endoribonuclease Dicer b; Belongs to the helicase family. Dicer subfamily.
    
 0.871
ACMD2_07120
Endoribonuclease Dicer a; Belongs to the helicase family. Dicer subfamily.
    
 0.871
ACMD2_19132
Endoribonuclease Dicer.
    
 0.859
ACMD2_19666
Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily.
    
 0.859
ACMD2_13652
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.816
ACMD2_03610
DNA-binding protein HEXBP.
    
 0.762
ACMD2_19433
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.750
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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