Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_10504Potassium channel AKT2. (813 aa)    
Predicted Functional Partners:
ACMD2_08727
Potassium channel KAT1.
    
   0.742
ACMD2_04042
Potassium channel KAT3.
    
   0.742
ACMD2_06617
Ras-related protein RABC1.
      
 0.692
ACMD2_03573
Chloride channel protein.
      
 0.682
ACMD2_05535
Triacylglycerol lipase 2.
      
 0.671
ACMD2_03150
Ammonium transporter.
      
 0.668
ACMD2_13126
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
      
 0.661
ACMD2_20095
Serine/threonine-protein kinase AFC3.
      
 0.660
ACMD2_13945
Ras-related protein RABC2a.
      
 0.658
ACMD2_21087
Ras-related protein RABC2a.
      
 0.658
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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