Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_14700WEB family protein. (653 aa)    
Predicted Functional Partners:
ACMD2_07936
Uncharacterized protein.
    
 0.831
ACMD2_21729
Uncharacterized protein.
    
 0.831
ACMD2_03112
Protein SPIRRIG.
    
 0.814
ACMD2_26658
WEB family protein, chloroplastic.
  
   
 0.783
ACMD2_26657
WEB family protein, chloroplastic.
  
   
 0.753
ACMD2_22100
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
    
 
 0.746
ACMD2_08991
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
    
 
 0.746
ACMD2_00020
Chromatin structure-remodeling complex protein SYD.
    
 0.716
ACMD2_09433
Ankyrin-3.
    
 0.697
ACMD2_17762
Serine/threonine-protein phosphatase BSL.
    
 0.642
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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