Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_08714Transcription factor TT2. (211 aa)    
Predicted Functional Partners:
ACMD2_15846
Dehydration-responsive element-binding protein 1F.
      
 0.624
ACMD2_00393
Exocyst complex component EXO84B.
      
 0.523
ACMD2_11862
Ethylene-responsive transcription factor-like protein.
      
 0.521
ACMD2_24807
Putative kinetochore protein NUF2.
   
  
 0.465
ACMD2_00300
Myb-related protein 3R-1.
  
     0.435
ACMD2_10950
Exocyst complex component EXO84B.
      
 0.434
ACMD2_04348
Exocyst complex component EXO84B.
      
 0.434
ACMD2_12551
Nudix hydrolase 18, mitochondrial.
      
 0.424
ACMD2_03795
Nudix hydrolase 17, mitochondrial.
      
 0.424
ACMD2_14790
Myb-related protein 3R-1.
  
     0.412
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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