STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_25059Putative GTP diphosphokinase RSH2, chloroplastic. (218 aa)    
Predicted Functional Partners:
ACMD2_02524
Putative GTP diphosphokinase CRSH1, chloroplastic.
  
  
 0.889
ACMD2_02601
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.845
ACMD2_17145
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.827
ACMD2_01172
Nucleoside diphosphate kinase.
    
 0.825
ACMD2_23780
Nucleoside diphosphate kinase.
    
 0.825
ACMD2_19862
Nucleoside diphosphate kinase.
    
 0.825
ACMD2_15394
Putative nucleoside diphosphate kinase 5; Belongs to the NDK family.
    
 0.825
ACMD2_06914
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.822
ACMD2_19512
Putative GTP diphosphokinase RSH1, chloroplastic.
  
  
  0.816
ACMD2_01920
Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
    
  0.809
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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