STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_14707Putative choline kinase 1. (538 aa)    
Predicted Functional Partners:
ACMD2_03494
Serine decarboxylase 1.
     
 0.903
ACMD2_26073
Phosphoethanolamine N-methyltransferase 1.
    
 0.883
ACMD2_21326
Phosphoethanolamine N-methyltransferase 1.
    
 0.883
ACMD2_15815
Glycerophosphodiester phosphodiesterase GDPD1, chloroplastic.
     
 0.861
ACMD2_12262
Choline-phosphate cytidylyltransferase 1.
   
 
 0.860
ACMD2_10184
Ethanolamine-phosphate cytidylyltransferase.
     
 0.850
ACMD2_09280
Ethanolamine-phosphate cytidylyltransferase.
     
 0.834
ACMD2_21395
Ethanolamine-phosphate cytidylyltransferase.
     
 0.834
ACMD2_10929
Glycerophosphodiester phosphodiesterase GDPD6.
     
  0.826
ACMD2_12122
Regulatory-associated protein of TOR 1.
    
 0.797
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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