Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACMD2_10609ATP synthase subunit c, chloroplastic; Belongs to the ATPase C chain family. (103 aa)    
Predicted Functional Partners:
ACMD2_19240
ATP synthase subunit a, chloroplastic.
  
 0.999
ACMD2_10608
ATP synthase subunit b, chloroplastic; Belongs to the ATPase B chain family.
  
 0.998
ACMD2_08648
ATP synthase subunit b, chloroplastic; Belongs to the ATPase B chain family.
  
 0.997
ACMD2_20119
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.996
ACMD2_08649
ATP synthase subunit alpha, chloroplastic.
 
 0.996
ACMD2_14616
ATP synthase subunit alpha, chloroplastic.
  
 0.996
ACMD2_12172
ATP synthase subunit b', chloroplastic; Belongs to the ATPase B chain family.
    
 0.995
ACMD2_09764
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.994
ACMD2_24076
ATP synthase subunit alpha, chloroplastic.
  
 0.994
ACMD2_15273
ATP synthase subunit beta, chloroplastic.
  
 0.994
Your Current Organism:
Ananas comosus
NCBI taxonomy Id: 4615
Other names: A. comosus, Ananas comosus var. comosus, Ananas lucidus, pineapple
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